Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888664.1_cds_XP_016443275.1_38446
CDS Infomation

[gene=LOC107768656] [db_xref=GeneID:107768656] [protein=small RNA 2'-O-methyltransferase-like isoform X2] [protein_id=XP_016443275.1] [location=complement(join(118853..119284,122290..122406,122484..122635,122801..123747,124142..124381,125219..125676,126353..126442,126939..127211))] [gbkey=CDS]
Sequence

ATGGAAACTGGAAGAAATCCAGCTAGTGGTCCAAAGAAATCGCCTTTCACGCCTAAGGCT
ATCATACATCAGAGATTTGCTGCTAAAGCTTGCTATAAGGTCGAGGAAGTTCAAGAGGTT
GCACAAAATGGATGTCCTGGTTTAGTGATCCCTCAGAAAGGTCCTTGCCTCTATCGCTGT
ACGCTCCAACTTCCAGATTTTTCTGTAGTCTCTGAAACCTTCAAAAGAAAGAAGGATGCT
GAGCAATCTGCTGCTGAGAAGGCTATACAAAAGTTAGGCATCCAGCCTAAAGAAGATAAT
CTCACTGTGGAGCAAGCGTGGGATGAACTGGCTGGTCGACTATCATATTTATTTTCAATT
GAGTTCTTGCCTTCAATTCATCCGCTTAGCGGTCACTTCAGAGCAGCATTGCAGAGAGGA
GGTCACCTTAGTGGATTTATTCCTGTAGCAGCTATTGCTGCGTTTGATGCTAAGATTAAT
AGCTTATGTAAATATATAAATCCTGAAGTGGAGTCGAATCACATTTTGGTGATGTCACTT
ATTATTGAAGCTGCTAAGAGGTTAGCGAATACGCTTTTGTTCTCTGAGGAGAAGCTTTCA
TTGCAGAGGCTAAATCCACACCCTCCTGAGATTATACAGTCTTTACTAAAGAATGAATCT
AGTTTCCCAGAGAGCATTTCAATTGAAGCAGTACGTATTCCAGCTTCAGCAGAGAAGATT
GTGGAACCTTCAATACTTGATGCCTCTTTTGGCAATTATTACCTGGATGCCATTGCAAAG
GAGCTAGGGGTTAAGGATGCTTCTAAGGTTCTGATTTCTAGGACTATTGGCAAAGCTTCC
TCAGAAACGAGGTTGTACTTCTGTGCTCCAGAATCCATAACGATTGGCCCATCATCAGAG
TTACATATGAAACTAGCCAGTTCATTTAGAGAATTTAATGCCCTTGCGACCTACCTATCT
GGTCAAGAAATATACGGTGATGCAATTTTGGCATCTGTAGGATACACCTGGAAGTCTACT
GATCTTTCTTATGAAGATTTATCCTTGCGTGCATATTACAGAATACTTGCCAACATGATA
CCTAGCGGAATTTACAAGTTGTCAAGAGAAGCAATACTTGCCGCAGAGCTGCCCACAACA
TTCACAACAAGGAGCAATTGGAGGGGTTCTTTGCCCAGAGATATTCTCTGCACATTTTGC
CGCCAGCATCGATTATCTGAACCTGTCTTTTCCAGCGATTCCTTTGAACCTCTGCCAGAT
TTAACTGGACGTAAAAGATTGAGGGATACAGCATCAAGTGGAGACGAAATTAATGAAGGT
GGTCTTGCTGCTACTGCTACTGCTGCTGCACAAGGAGGGTGTACTCTAGTCTATAGATGT
ACAGTGAAGATATACTCCAAGTACCAGGATTTGATTCTGCTGTGTTCGCCAAAGGAATCT
TATAAGAAACAGACTGATGCAATTCATAATGCTGCTTTAAAAGTTCTCTTATGGTTGGAT
AGATTTCTTGATAAAGTTGCTATGTCTGTGGAGGAGATGACATCGTCTGCAAAGGGACTT
GATGTTCTTACTTATCCTCAACAGTTTGTTAAGGAGTTCTCATCATGTCAATTCTTGCCC
AAATATCGGTGGAGCACTGCAACACTAGCAGACAGCTCTCTGTGTTCTAGCTACTCTTAT
GTACAGAAGAACACGCTAGAAGACGAAGTAGCATCTGTTAGGATAAGTGGTGAATATTCT
GGAACGACTCCATCTAATGGTTCTTTGGTGTGTGTGACATACAACATATATTTAGTCACG
GAAAGGGAAGGCATTAAGGAACAGCTTGAAGGGTCTAAAGAGTTTGAATTTGAGATTGGC
AGTGGAGCCACATCACCTGTTCTCGAAGCAGTTGTAACACAGATGTCCATTGATCAGTTT
GCATGTTTTACTATGGAATTGCCTTCCAAAGAGATTGTTCTAGCAGTGGCTCGTGATTCA
ACAACTGTCCTTTCATTATTGTCTTCAGGTACTTGTACGATGAAATGTGAAGTCACCTTG
CTGCGGGTGACAGTACCCCTGGAGGATAGAATGGAACAGGCCTTATTCACTCCCCCATTA
TCAAAACAACGTGTTGAATATGCATTGCAGCACATTAGAGAATCTTGTGCTGCCTCTTTG
GTTGATTTTGGATGTGGTTCTGGAAGTCTCCTGGAGTCTTTATTAGCTTATCAAACCTCT
CTTGAGAAAATAGTAGGCGTTGATATTTCACAGAAAGCTCTTGCTCGTGCTGCCAAGGTG
ATTGAACACATGGAGGAACATGAAGCGTGCTTGTTTGGCGATATTGTGCTCAGTTCATTT
TGTCCACAGATTCTTATAGTCTCCACTCCCAATTATGAGTACAATGTGATTCTCCAGAAT
TCTTCTCCTCAATACCAGGAAGAGGATCCAGATGAGAAGAGCCAGCAGCAATCTTGCAAA
TTTCGCAATCACGATCACAAATTCGAGTGGACTAGACAGCAATTTTGCCAATGGGCATCT
GAGCTAGCTTTAAGGCATAATTATGATGTTGAGTTCAGTGGAGTTGGCGGAGAGCCTAAC
AAAGAACCAGGATTTGCCTCCCAAATTGCTGTCTTTAGAAGAAAAGATGGCAGTCCCGCT
AATGCAGACTTTACTGAACACTTTGATGTTATTTGGGAATGGAGTAGCAGCAGTAATTCA
AGATCTTAA

Peptide Sequence

PEP ID

XP_016443275.1
PEP Infomation

PREDICTED: small RNA 2'-O-methyltransferase-like isoform X2 [Nicotiana tabacum]
Sequence

METGRNPASGPKKSPFTPKAIIHQRFAAKACYKVEEVQEVAQNGCPGLVIPQKGPCLYRC
TLQLPDFSVVSETFKRKKDAEQSAAEKAIQKLGIQPKEDNLTVEQAWDELAGRLSYLFSI
EFLPSIHPLSGHFRAALQRGGHLSGFIPVAAIAAFDAKINSLCKYINPEVESNHILVMSL
IIEAAKRLANTLLFSEEKLSLQRLNPHPPEIIQSLLKNESSFPESISIEAVRIPASAEKI
VEPSILDASFGNYYLDAIAKELGVKDASKVLISRTIGKASSETRLYFCAPESITIGPSSE
LHMKLASSFREFNALATYLSGQEIYGDAILASVGYTWKSTDLSYEDLSLRAYYRILANMI
PSGIYKLSREAILAAELPTTFTTRSNWRGSLPRDILCTFCRQHRLSEPVFSSDSFEPLPD
LTGRKRLRDTASSGDEINEGGLAATATAAAQGGCTLVYRCTVKIYSKYQDLILLCSPKES
YKKQTDAIHNAALKVLLWLDRFLDKVAMSVEEMTSSAKGLDVLTYPQQFVKEFSSCQFLP
KYRWSTATLADSSLCSSYSYVQKNTLEDEVASVRISGEYSGTTPSNGSLVCVTYNIYLVT
EREGIKEQLEGSKEFEFEIGSGATSPVLEAVVTQMSIDQFACFTMELPSKEIVLAVARDS
TTVLSLLSSGTCTMKCEVTLLRVTVPLEDRMEQALFTPPLSKQRVEYALQHIRESCAASL
VDFGCGSGSLLESLLAYQTSLEKIVGVDISQKALARAAKVIEHMEEHEACLFGDIVLSSF
CPQILIVSTPNYEYNVILQNSSPQYQEEDPDEKSQQQSCKFRNHDHKFEWTRQQFCQWAS
ELALRHNYDVEFSGVGGEPNKEPGFASQIAVFRRKDGSPANADFTEHFDVIWEWSSSSNS
RS

Transcript Sequence

Gene sequence data has not been registered.